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A safer zlib

Rust 443 20 Updated Apr 1, 2025

A list of interesting genome browser and genome visualization programs

TypeScript 931 119 Updated Mar 28, 2025

A very small Cloudflare Worker that compares response times of KV to D1

TypeScript 19 1 Updated Apr 4, 2024

Unofficial Bitwarden compatible server written in Rust, formerly known as bitwarden_rs

Rust 43,085 2,038 Updated Mar 19, 2025

Run Length Encoded vectors for julia, inspired by BioConductor.

Julia 20 7 Updated Jan 13, 2024
R 4 Updated Nov 28, 2024

The MultipleTesting package offers common algorithms for p-value adjustment and combination and more…

Julia 38 7 Updated Nov 12, 2023
Lean 1 Updated Nov 5, 2023

Independent Hypothesis Weighting for multiple testing with side-information in Julia

Julia 6 1 Updated Aug 1, 2023

C++ Implementations of sketch data structures with SIMD Parallelism, including Python bindings

C++ 152 13 Updated Jul 23, 2024

Wally: Visualization of aligned sequencing reads and contigs

C++ 113 6 Updated Dec 20, 2024

Reproduction code for "Empirical Bayes mean estimation with nonparametric errors via order statistic regression on replicated data"

R 4 1 Updated Apr 29, 2022

Per-base per-nucleotide depth analysis

Rust 126 17 Updated Jan 16, 2025

Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.

Rust 118 4 Updated Dec 30, 2020

Bioinformatics I/O libraries in Rust

Rust 569 57 Updated Mar 27, 2025

Conda environment and package management extension from within Jupyter

TypeScript 270 32 Updated Jan 6, 2025

Statistical bootstrapping library for Julia

Julia 111 27 Updated Nov 5, 2023
Rust 12 3 Updated Aug 12, 2019

ntHash implementation in Rust

Rust 35 6 Updated Jul 12, 2024

Slides & exercises from the presentation on Rust concurrency

Rust 2 3 Updated Apr 26, 2019

A Wes Anderson color palette for R

R 2,000 147 Updated Jun 13, 2024
Rust 51 14 Updated Sep 20, 2022

A fast file deduplicator

Rust 192 8 Updated Sep 4, 2023

A cat(1) clone with wings.

Rust 52,002 1,287 Updated Apr 1, 2025

A command-line benchmarking tool

Rust 24,670 391 Updated Apr 1, 2025

This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.

Rust 324 84 Updated Mar 15, 2025

Color DNA/RNA bases in terminal output

Python 20 3 Updated Aug 29, 2017

The Platinum Genomes Truthset

86 9 Updated Nov 8, 2017

Python for Bioinformatics

OpenEdge ABL 253 105 Updated Oct 1, 2020
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